CDS

Accession Number TCMCG057C47789
gbkey CDS
Protein Id XP_018457386.1
Location complement(join(5164368..5164457,5164565..5164708,5164824..5164919,5164998..5165063,5165160..5165333,5165460..5165630,5165776..5165871,5165950..5166012,5166154..5166213,5166322..5166426,5166516..5166605,5166704..5166793,5166887..5168614))
Gene LOC108828253
GeneID 108828253
Organism Raphanus sativus

Protein

Length 990aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018601884.1
Definition PREDICTED: exportin-T isoform X3 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category JUY
Description Exportin 1-like protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K14288        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000049        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005049        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006409        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008536        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009933        [VIEW IN EMBL-EBI]
GO:0010014        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016363        [VIEW IN EMBL-EBI]
GO:0017016        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031267        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048532        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051031        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071431        [VIEW IN EMBL-EBI]
GO:0071528        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0097064        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140104        [VIEW IN EMBL-EBI]
GO:0140142        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGACCTTGAAAACGCAATACTAATCAGCTTCGAATCTGGTCCTGTCGAAGCTTCGTTAAAGTCTCACGCCGTTAGTTACTGTCAGCAAATCAAGGAAACGCCGGATGTGTTTAGGATTTGTATCCACAAGCTCTGGTTCTGTAACCTTGTCCAAGTCCAGTTCTGGTGTCTCCAGACTCTCCAGGACGTTCTGAGGGTCAGGTACGGATCCATGAGCTCGGAGGAGAGGAGTTTCGTGAGGAGCTCGGTGTTCTCGATGGCGTGTCTGGACGGTGTTGATAACAATGAGGGCCTTGTGAGGGTTGTGGAAGGGCCTGTGTTTGTTAAGAACAAGCTCGCTCAGGTTTTGGTTACTCTGATCTACTTTGAGTACCCTTCGGTTTGGTATTCTGTGTTTGTTGATTTCATGAGGTGTCTGAGCAAGGGAGGTGTTGTGATTGACATGTTTTGTCGGGTTTTGAATGGGTTGGATGATGAGTTGATTAGCTTGGATTACCCTCGGTCCCCTGAGGAGATTGCGGTGGCTGCTCGGGTTAAGGATGCGATGAGGCAGCAGTGTGTCCCTCAGATTGCTAAAGCTTGGTATGACATTGTCTCCATGTACAGGAACTCTGATCCTGATCTGTGCGCTACGGTGTTGGATTGTATGAGGAGGTTTGTGTCTTGGATTGATATTAATCTTGTTGCGAATCAAATGTTTGTTGCGCTGCTGTTTGAGTTGATTTTGTCTGAGGGGTTGGCTGATCAAGTCCGTGGTGCAGCTGCTGGGTGTGTCTTGGCCACGGTTGCTAAGCGGATGGAGCCCCACTCGAAACTGCCTCTCTTGAAGGAGCTCCATATAAGCCGTGTTTTTGGTTTAGTAGTGTCGGGAGATGCTGATTCAGAGCTTGTGTCTGAGGTGTCCGCTCTGGTTACTGGCTATGCTGTTGAGGTTCTGGAGTGCCATAAGCGGTTGAACTCAGAGGAGACCAAGGCAGTCTCCATGGATCTGCTGAACGAAGTTCTGCCATCGGTTTTTTACGTCATGCGGAACTGTGAGGTTGACTCTACTTTTAGTATCGTCCAGTTTCTCATGGGTTACGTTTCGACTCTCAAAGGCTTCCCTGCACTGAAGGAGAAGCAGCTCCTCCACATTAATCAGATTCTTGAAGTGATCAGGATCCAGATTTGCTACGACCCTATGTATCGTAGCAACCTTGACTCGCTGGATAAGATTGGGTTGGAAGAGGAAGATAGAATGTCCGAGTTTAGAAAAGATCTCTTCGTCTTGTTGCGTACAGTGGGACGTGTTGCTCCTGAAGTTACGCAGCATTTCATCCGAAACGCTCTAGGAAACGCTGTTAAATCCTCTTCTGAGAGAAACGTGGAAGAAGTGGAAGCTGCGCTCTCGCTTTTGTATTCGCTTGGAGAGGCTATGACGGAGGAGGCCATGAAAACAGGATCTGGATGTTTGAGTGAATTGATTCCAATGCTGTTGACCACTAAGTTCCCTGGTCATTCTCATAGGCTAGTGGCACTTGTGTACTTGGAAAACATAACTAGGTACATGAAGTTTATCCAGGAACATTCTCAGTACATTCCAAATGTTCTTGGTGCTTTCCTTGATGAAAGGGGTTTGCATCACCAGAACGTCCATGTGAGCCGTAGAGCTTATTACTTGTTCATGAGAGTGGTTAAACTGTTGAAATCAAAGCTTGTTCCGTACATTGATGAGATCCTGCAGAATCTCCAAGATACGTTGTCCCAGTTGACAACCATGAACTTTGCATCAAGAGGACTTTCAGGAACTGAAGATGGCAGTCACATTTTTGAGGCCATTGGCTTAATCATAGGGCTAGAGGATGTTCCAGCTGAAAAGCAGTCAGATTATCTATCTTTACTGCTTACTCCTCTCTGTCAACAGATTGAGAACGGACTTATGGAGGCAAAAGTCGCAAGTTCCGAAAACTTTCATGCAAAAATTGCTAATATCCAGTTTGCCATTGTGGCTATTAATGCTCTCAGCAAGGGATTTAGTGAACGTCTTGTTACTGCGAGCCGTCCTCGAATTGGTCTCATGTTTAAGCAGACACTAGACATGCTTCTAAGGATTTTGATCGAGTTTCCAAAGGTTGAGCCTTTGCGGAGTAAGGTCATATCACTCATACATCGTATGGTTGAAACCCTTGGACCCTCTGTGTTGCCCTATCTTCCCAGGGCTTTAGAACAGCTACTTGCTGACAGTGAGCAGCCGAAGGAAATGGTTGGTTTCCTGGTACTACTCAATCAGCTCATCTGCAAGTTCGGCACCTCTCTCCGTGGTATACTGGACGAAGTCTATCCTGTGGTTGCCTATAGGATTTTCAAAGTAATTCCAAGAGGAGATGACTCACCCTCACGTTCTGTTACTATTACTGAGGAAATGAGGGAATTGATCGAGCTTCAAAGGACGCTGTACACGTTTCTTCATGTGATGGCCACACATGATCTCTCTTCTGTATTCCTTACCCCTAAGTGTGAGCCGTATTATGAACCAATGATGCAGCTGCTTTTGACCACTTCTTGTACTCACAAGGACATTACTGTGCGAAAGGCATGCGTGCAGATATTTATTAGACTAATTGAAGATTGGTGTCCCAAGCCATACACAGAGGAGAAGGTCCCAGGTTTTGATCTCAAGATCAAAACTTTTGCAACAAACTGCTGCTTTTACAGTGTACTTGATAAGTCTTTTGACTTCAATGATGCGAATACTGGCTTGTTCAGTGAAATCATCAAGGCTCAGAAAGTGATGTATGACAAATTTGGTGATGCATTTCTCATGCATCTTTTGTCTGGAGCTTTTCCATCTTCAGATCGTCCACAAGATTTGGCCGAGCAGTATCGCCAAAAGTTGCAGGGTAATGATAATGGGGGCCTCAAGTTATACTACCAGTCCCTCATAAAAAATCTCAGGCTTCAACAAAACGGGAATCATGTTTTCAGATAG
Protein:  
MDDLENAILISFESGPVEASLKSHAVSYCQQIKETPDVFRICIHKLWFCNLVQVQFWCLQTLQDVLRVRYGSMSSEERSFVRSSVFSMACLDGVDNNEGLVRVVEGPVFVKNKLAQVLVTLIYFEYPSVWYSVFVDFMRCLSKGGVVIDMFCRVLNGLDDELISLDYPRSPEEIAVAARVKDAMRQQCVPQIAKAWYDIVSMYRNSDPDLCATVLDCMRRFVSWIDINLVANQMFVALLFELILSEGLADQVRGAAAGCVLATVAKRMEPHSKLPLLKELHISRVFGLVVSGDADSELVSEVSALVTGYAVEVLECHKRLNSEETKAVSMDLLNEVLPSVFYVMRNCEVDSTFSIVQFLMGYVSTLKGFPALKEKQLLHINQILEVIRIQICYDPMYRSNLDSLDKIGLEEEDRMSEFRKDLFVLLRTVGRVAPEVTQHFIRNALGNAVKSSSERNVEEVEAALSLLYSLGEAMTEEAMKTGSGCLSELIPMLLTTKFPGHSHRLVALVYLENITRYMKFIQEHSQYIPNVLGAFLDERGLHHQNVHVSRRAYYLFMRVVKLLKSKLVPYIDEILQNLQDTLSQLTTMNFASRGLSGTEDGSHIFEAIGLIIGLEDVPAEKQSDYLSLLLTPLCQQIENGLMEAKVASSENFHAKIANIQFAIVAINALSKGFSERLVTASRPRIGLMFKQTLDMLLRILIEFPKVEPLRSKVISLIHRMVETLGPSVLPYLPRALEQLLADSEQPKEMVGFLVLLNQLICKFGTSLRGILDEVYPVVAYRIFKVIPRGDDSPSRSVTITEEMRELIELQRTLYTFLHVMATHDLSSVFLTPKCEPYYEPMMQLLLTTSCTHKDITVRKACVQIFIRLIEDWCPKPYTEEKVPGFDLKIKTFATNCCFYSVLDKSFDFNDANTGLFSEIIKAQKVMYDKFGDAFLMHLLSGAFPSSDRPQDLAEQYRQKLQGNDNGGLKLYYQSLIKNLRLQQNGNHVFR